Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository abritamr
Name: abritamr
Owner: iuc
Synopsis: A pipeline for running AMRfinderPlus and collating results into functional classes
abriTAMR is an AMR gene detection pipeline that runs AMRFinderPlus on a single (or list ) of given isolates and collates the results into a table, separating genes identified into functionally relevant groups.
Content homepage: https://zenodo.org/record/7370628
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/abritamr
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/abritamr/468fd92deaaa
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/abritamr
Type: unrestricted
Revision: 5:468fd92deaaa
This revision can be installed: True
Times cloned / installed: 211

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
AMR gene detection with AMRFinderPlus 1.0.19+galaxy1 22.05

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis