Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository featurecounts
Name: featurecounts
Owner: iuc
Synopsis: featureCounts counts the number of reads aligned to defined masked regions in a reference genome
Counts reads aligned to annotated genes in a reference genome from SAM or BAM files.
Content homepage: https://subread.sourceforge.net/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/featurecounts
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/featurecounts/46cccc52be5f
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/featurecounts
Type: unrestricted
Revision: 10:46cccc52be5f
This revision can be installed: True
Times cloned / installed: 19591

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Measure gene expression in RNA-Seq experiments from SAM or BAM files. 1.6.0.2 16.04

Categories
RNA - Utilities for RNA
Transcriptomics - Tools for use in the study of Transcriptomics.
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis