Repository seurat_reduce_dimension
Name: seurat_reduce_dimension
Owner: iuc
Synopsis: Wrapper for the seurat tool suite: Seurat Run Dimensional Reduction
Seurat is an R package designed for QC, analysis, and exploration of single-cell RNA-seq data. Seurat aims to enable users to identify and interpret sources of heterogeneity from single-cell transcriptomic measurements, and to integrate diverse types of single-cell data.
Content homepage: https://satijalab.org/seurat/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/seurat_v5
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/seurat_reduce_dimension/46ed93e8da30
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/seurat_reduce_dimension
Type: unrestricted
Revision: 1:46ed93e8da30
This revision can be installed: True
Times cloned / installed: 187

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
- PCA, tSNE or UMAP 5.0+galaxy0 23.0

Categories
Single Cell - Tools for single cell analyses
Transcriptomics - Tools for use in the study of Transcriptomics.
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis