Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository data_manager_cat
Name: data_manager_cat
Owner: iuc
Synopsis: Contig Annotation Tool (CAT) Data Manager
Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) are pipelines for the taxonomic classification of long DNA sequences and metagenome assembled genomes (MAGs/bins) of both known and (highly) unknown microorganisms, as generated by contemporary metagenomics studies. This data manager installs reference data used by these applications. A reference data set requires about 250GB of disk space.
Content homepage: https://github.com/dutilh/CAT
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_cat/472dabcb03bf
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_cat
Type: unrestricted
Revision: 2:472dabcb03bf
This revision can be installed: True
Times cloned / installed: 202

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Install a new CAT database 5.0.3.1 18.09

Data Managers
Name Version Data Tables
data_manager_cat 0.0.1 cat_database

Categories
Data Managers - Utilities for Managing Galaxy's built-in data cache
Metagenomics - Tools enabling the study of metagenomes