Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository vcfdistance
Name: vcfdistance
Owner: devteam
Synopsis: Calculate distance to the nearest variant.
Adds a value to each VCF record indicating the distance to the
nearest variant in the file.     The dataset used as input to this tool must be
coordinate sorted. This can be achieved by either using the VCFsort utility or Galaxy''s
general purpose sort tool (in this case sort on the first and the second column
in ascending order).
Content homepage: https://github.com/ekg/vcflib
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcfdistance
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/vcfdistance/48e458c721b3
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcfdistance
Type: unrestricted
Revision: 1:48e458c721b3
This revision can be installed: True
Times cloned / installed: 3087

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Calculate distance to the nearest variant 1.0.0_rc1.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA