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Repository vcfdistance
Name: vcfdistance
Owner: anton
Synopsis: Calculate distance to the nearest variant.
Adds a value to each VCF record indicating the distance to the nearest variant in the file.     The dataset used as input to this tool must be coordinate sorted. This can be achieved by either using the VCFsort utility or Galaxy's general purpose sort tool (in this case sort on the first and the second column in ascending order). 
Link to this repository: https://toolshed.g2.bx.psu.edu/view/anton/vcfdistance/49482c68e701
Type: unrestricted
Revision: 3:49482c68e701
This revision can be installed: True
Times cloned / installed: 222
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Repository package_vcflib_8a5602bf07 revision bffe0495cd92 owned by anton

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Name Version Type
vcflib 8a5602bf07 package

Contents of this repository

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Name Description Version Minimum Galaxy Version
Calculate distance to the nearest variant 0.0.2 any

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis