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Repository dimet_abundance_plot
Owner: iuc
Synopsis: Wrapper for DIMet application dimet abundance plot.
DIMet is a bioinformatics pipeline for differential and time-course analysis of targeted isotope-labeled metabolomics data. DIMet supports the differential analysis of targeted tracer metabolomics data, which is offered in three modes: (i) pairwise differential analysis, (ii) time-course, or (iii) multigroup analysis. To do so, DIMet accepts three types of measures: a) isotopologues quantifications, b) fractional contributions (also known as mean enrichment), c) full metabolites abundances. Our tool also performs visualizations of these types of data. Moreover, DIMet offers a pathway-based omics integration between Transcriptomics and Isotope-labeled targeted Metabolomics, using Metabolograms.
Content homepage: https://github.com/cbib/DIMet
Type: unrestricted
Revision: 7:4b4dead87318
This revision can be installed: True
Times cloned / installed: 254

Contents of this repository

Name Description Version Minimum Galaxy Version
Figures of metabolites total abundance as barplots (by DIMet) 0.2.4+galaxy4 20.05

Categories
Metabolomics - Tools for use in the study of Metabolomics