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Repository vcfleftalign
Name: vcfleftalign
Owner: anton
Synopsis: Left-align indels and complex variants in VCF dataset
Left-aligns variants in VCF dataset.  Window size is determined dynamically according to the entropy of the regions flanking the indel.  These must have entropy > 1 bit/bp, or be shorter than ~5kb.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/anton/vcfleftalign/520aae0d09e2
Type: unrestricted
Revision: 3:520aae0d09e2
This revision can be installed: True
Times cloned / installed: 214
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Repository package_vcflib_8a5602bf07 revision bffe0495cd92 owned by anton

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Name Version Type
vcflib 8a5602bf07 package

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Name Description Version Minimum Galaxy Version
Left-align indels and complex variants in VCF dataset 0.0.2 any

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis