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Name: edger
Owner: iuc
Synopsis: Perform RNA-Seq differential expression analysis using edgeR pipeline
Apply edgeR pipeline on a table of tab separated count data to generate HTML report for differential expression analysis. Report includes BCV, MDS and smear plots as well as summarised table of statistics on each gene.
Content homepage: http://bioconductor.org/packages/release/bioc/html/edgeR.html
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/edger
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/edger/555659de7321
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/edger
Type: unrestricted
Revision: 6:555659de7321
This revision can be installed: True
Times cloned / installed: 3839

Contents of this repository

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Name Description Version Minimum Galaxy Version
Perform differential expression of count data 3.24.1 16.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA
Statistics - Tools for generating statistics