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Name: edger
Owner: iuc
Synopsis: Perform RNA-Seq differential expression analysis using edgeR pipeline
Apply edgeR pipeline on a table of tab separated count data to generate HTML report for differential expression analysis. Report includes BCV, MDS and smear plots as well as summarised table of statistics on each gene.
Content homepage: http://bioconductor.org/packages/release/bioc/html/edgeR.html
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/edger
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/edger/5bf899c13979
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/edger
Type: unrestricted
Revision: 15:5bf899c13979
This revision can be installed: True
Times cloned / installed: 3835

Contents of this repository

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Name Description Version Minimum Galaxy Version
Perform differential expression of count data 3.36.0+galaxy4 16.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA
Statistics - Tools for generating statistics