Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository artic_guppyplex
Name: artic_guppyplex
Owner: iuc
Synopsis: ARTIC guppyplex (ARTIC tool suite)
The artic pipeline is designed to help run the artic bioinformatics protocols;
for example the nCoV-2019 novel coronavirus protocol.
Features include: read filtering, primer trimming, amplicon coverage normalisation,
variant calling and consensus building
Content homepage: https://github.com/artic-network/fieldbioinformatics
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/artic_guppyplex/5ceeb5a5d70f
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/artic_guppyplex
Type: unrestricted
Revision: 1:5ceeb5a5d70f
This revision can be installed: True
Times cloned / installed: 290

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Filter Nanopore reads by read length and (optionally) quality 1.2.1+galaxy1 20.09

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis