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Repository spades_rnaviralspades
Name: spades_rnaviralspades
Owner: iuc
Synopsis: De novo assembler for transcriptomes, metatranscriptomes and metaviromes.
rnaviralSPAdes is a pipeline specially designed for de novo assembler tailored for RNA viral datasets (transcriptome, metatranscriptome and metavirome).
Content homepage: https://github.com/ablab/spades
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/spades
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/spades_rnaviralspades/5df83f4bad67
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/spades_rnaviralspades
Type: unrestricted
Revision: 0:5df83f4bad67
This revision can be installed: True
Times cloned / installed: 470

Contents of this repository

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Name Description Version Minimum Galaxy Version
de novo assembler for transcriptomes, metatranscriptomes and metaviromes 3.15.3+galaxy0 20.01

Categories
Assembly - Tools for working with assemblies
RNA - Utilities for RNA
Metagenomics - Tools enabling the study of metagenomes