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Repository garnett_get_std_output
Name: garnett_get_std_output
Owner: ebi-gxa
Synopsis: Wrapper for the Garnett tool suite: Garnett - get standard output
Garnett is a software package that faciliates automated cell type classification from single-cell expression data.
Development repository: https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/ebi-gxa/garnett_get_std_output/5f05e2901299
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/garnett_get_std_output
Type: unrestricted
Revision: 3:5f05e2901299
This revision can be installed: True
Times cloned / installed: 234

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Name Description Version Minimum Galaxy Version
Get final output in standard format to allow for downstream analysis of predicted labels by tools of the EBI gene expression group's cell-types-analysis package 0.2.8+galaxy1 18.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA
Statistics - Tools for generating statistics
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis