Name: tag_pileup_frequency

Owner: iuc

Synopsis: Contains a tool that generates a frequency pileup of the 5' ends of aligned reads in a BAM file relative to reference points in a BED file.

Content homepage: https://github.com/seqcode/cegr-tools/tree/master/src/org/seqcode/cegrtools/tagpileup

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/tag_pileup_frequency

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/tag_pileup_frequency/6432735cdb22

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/tag_pileup_frequency

Type: unrestricted

Revision: 2:6432735cdb22

This revision can be installed: True

Times cloned / installed: 488

Statistics - Tools for generating statistics

SAM - Tools for manipulating alignments in the SAM format

Genomic Interval Operations - Tools for operating on genomic intervals