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Repository bowtie2
Name: bowtie2
Owner: devteam
Synopsis: Bowtie2: Fast and sensitive read alignment
Bowtie is an ultrafast and memory-efficient tool for aligning sequencing
reads to long reference sequences. It is particularly good at aligning reads of
about 50 up to 100s or 1,000s of characters to relatively long (e.g. mammalian)
genomes. Bowtie 2 supports gapped, local, and paired-end alignment modes. Bowtie
2 outputs alignments in SAM format, enabling interoperation with a large number
of other tools.
Content homepage: http://bowtie-bio.sourceforge.net/bowtie2
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/bowtie2
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/bowtie2/66f992977578
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/bowtie2
Type: unrestricted
Revision: 17:66f992977578
This revision can be installed: True
Times cloned / installed: 26303

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
- map reads against reference genome 2.3.2.2 17.01

Categories
Next Gen Mappers - Tools for the analysis and handling of Next Gen sequencing data