| decoupler is a package containing different statistical methods to extract biological activities from omics data within a unified framework. It allows to flexibly test any method with any prior knowledge resource and incorporates methods that take into account the sign and weight. It can be used with any omic, as long as its features can be linked to a biological process based on prior knowledge. |
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/decoupler_pseudobulk
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| aggregates single cell RNA-seq data for running bulk RNA-seq methods | 1.4.0+galaxy2 | 20.05 | |