Repository suite_samtools
Name: suite_samtools
Owner: iuc
Synopsis: A suite of Galaxy tools designed to work with the SAMtools package.
SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence
alignments.  These associated Galaxy utilities consist of a Galaxy Data
Manager contained in the repository named data_manager_sam_fasta_index_builder and Galaxy tools
contained in several separate repositories.
Content homepage: https://github.com/samtools/samtools
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/suite_samtools/68edce78a780
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/suite_samtools
Type: repository_suite_definition
Revision: 5:68edce78a780
This revision can be installed: True
Times cloned / installed: 435
Dependencies of this repository

Repository dependencies - A suite of Galaxy tools designed to work with the SAMtools package.
Repository samtools_bedcov revision 6856f8a01905 owned by devteam
Repository samtools_calmd revision 26b4f9f98aca owned by devteam
Repository samtools_depth revision 971dc85e9441 owned by iuc
Repository samtools_fastx revision 66e23b11feae owned by iuc
Repository samtools_fixmate revision e5ece8fa99de owned by iuc
Repository samtools_flagstat revision fefd89ab563c owned by devteam
Repository samtools_idxstats revision fa5d3e61e429 owned by devteam
Repository samtools_markdup revision a389f74c3630 owned by iuc
Repository samtools_merge revision 65a38e8c8e2a owned by iuc
Repository samtools_mpileup revision b61f5d6a7f25 owned by devteam
Repository samtools_phase revision 1e5880498f52 owned by devteam
Repository samtools_reheader revision 85e38b31e8b3 owned by devteam
Repository samtools_sort revision d54a4df48867 owned by devteam
Repository samtools_split revision bd850490c7f1 owned by devteam
Repository samtools_stats revision 541082d03bef owned by devteam
Repository samtools_view revision 2dce91e11ca7 owned by iuc
Repository samtools_coverage revision c4ff13d2aab3 owned by iuc

Categories
SAM - Tools for manipulating alignments in the SAM format