Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository samtools_ampliconclip
Name: samtools_ampliconclip
Owner: iuc
Synopsis: clip primer regions from bams
This tool uses the SAMtools toolkit to clip off the bases derived from PCR primers in amplicon sequencing
Content homepage: http://www.htslib.org/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_ampliconclip
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/samtools_ampliconclip/6a8febad1f6c
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/samtools_ampliconclip
Type: unrestricted
Revision: 2:6a8febad1f6c
This revision can be installed: True
Times cloned / installed: 154

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
clip primer bases from bam files 1.15.1+galaxy2 20.05

Categories
SAM - Tools for manipulating alignments in the SAM format
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis