| HUMAnN is a pipeline for efficiently and accurately profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data (typically millions of short DNA/RNA reads). This process, referred to as functional profiling, aims to describe the metabolic potential of a microbial community and its members. More generally, functional profiling answers the question "What are the microbes in my community-of-interest doing (or capable of doing)?" |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/humann
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| to profile presence/absence and abundance of microbial pathways and gene families | 3.0.0+galaxy1 | 20.01 | |