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Repository infer_rnaformer
Name: infer_rnaformer
Owner: rnateam
Synopsis: Wrapper for RNAformer inference RNAformer.
RNAformer is a deep learning-based RNA secondary structure prediction model. It currently outputs the predicted secondary structure as a list of base pair positions and the secondary structure in dot-bracket notation, given RNA sequences as either plain text or a FASTA file.
Content homepage: https://github.com/automl/RNAformer
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/rnaformer
Link to this repository: https://toolshed.g2.bx.psu.edu/view/rnateam/infer_rnaformer/6c310acd2f87
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/rnateam/infer_rnaformer
Type: unrestricted
Revision: 1:6c310acd2f87
This revision can be installed: True
Times cloned / installed: 135

Contents of this repository

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Name Description Version Minimum Galaxy Version
Predict the secondary structure of an RNA with RNAformer 1.2.0+galaxy1 22.05

Categories
RNA - Utilities for RNA