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Repository quast

Name: quast

Owner: iuc

Synopsis: Quast (Quality ASsessment Tool) evaluates genome assemblies.

Detailed description:

QUAST evaluates genome assemblies by computing various metrics, including - N50, length for which the collection of all contigs of that length or longer covers at least 50% of assembly length, - NG50, where length of the reference genome is being covered, - NA50 and NGA50, where aligned blocks instead of contigs are taken, - misassemblies, misassembled and unaligned contigs or contigs bases, - genes and operons covered.

Content homepage: http://quast.bioinf.spbau.ru/

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/quast/6fcbee531de6

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/quast

Type: unrestricted

Revision: 3:6fcbee531de6

This revision can be installed: True

Times cloned / installed: 3562