Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository hicup_truncater
Name: hicup_truncater
Owner: bgruening
Synopsis: Wrapper for the HiCUP suite tool: Hicup Truncater
A galaxy wrapper implementation of the HiCUP-Pipeline from the Bioinformatics Babraham Institute. See http://www.bioinformatics.babraham.ac.uk/projects/hicup/
Content homepage: https://www.bioinformatics.babraham.ac.uk/projects/hicup/read_the_docs/html/index.html
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/hicup
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/bgruening/hicup_truncater/71278c4f1b2e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicup_truncater
Type: unrestricted
Revision: 6:71278c4f1b2e
This revision can be installed: True
Times cloned / installed: 476

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
terminates sequence reads at specified Hi-C ligation junctions. 0.8.3+galaxy0 16.01

Categories
Epigenetics - Tools for analyzing Epigenetic/Epigenomic datasets