Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository sam2interval
Name: sam2interval
Owner: devteam
Synopsis: Convert SAM to interval.
Converts positional information from a SAM dataset into interval
format with 0-based start and 1-based end. CIGAR string of SAM format is used to
compute the end coordinate.
Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tools/sam2interval
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/sam2interval/75557c0908a9
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/sam2interval
Type: unrestricted
Revision: 1:75557c0908a9
This revision can be installed: True
Times cloned / installed: 2998

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
to interval 1.0.2 16.04

Categories
SAM - Tools for manipulating alignments in the SAM format