| CrossMap is versatile tool to convert genome coordinates or annotation files between genome assemblies. It supports mostly commonly used file types, including BAM, BED,BigWig, GFF, GTF, SAM, Wiggle, and VCF formats. For large plain text file types, such as BED, GFF, GTF and VCF, reading from remote servers and file compression are supported. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/crossmap_gff
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| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| Convert genome coordinates or annotation files between genome assemblies | 0.7.0+galaxy0 | 20.05 | |