Galaxy |

Repository vcf2tsv

Name: vcf2tsv

Owner: devteam

Synopsis: Converts VCF files into tab-delimited format

Detailed description:

Converts stdin or given VCF file to tab-delimited format, using
null string to replace empty values in the table. Specifying -g will output one
line per sample with genotype information. A part of the vcflib utilities developed
by Erik Garrison (https://github.com/ekg/vcflib).

Content homepage: https://github.com/ekg/vcflib

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcf2tsv

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/vcf2tsv/77e1141bbd29

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcf2tsv

Type: unrestricted

Revision: 0:77e1141bbd29

This revision can be installed: True

Times cloned / installed: 3384

Tool dependencies - repository tools require handling of these dependencies
Name	Version	Type
vcflib	8a5602bf07	package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name	Description	Version	Minimum Galaxy Version
VCFtoTab-delimited: View tool metadata	Convert VCF data into TAB-delimited format	0.0.2	any

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata

Name

Description

Version

Minimum Galaxy Version

View tool metadata

Convert VCF data into TAB-delimited format

0.0.2

any