Repository revision
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Repository peptideshaker
Name: peptideshaker
Owner: galaxyp
Synopsis: PeptideShaker and SearchGUI
Runs multiple search engines (X! Tandem, OMSSA and MS-GF+) on any number of MGF peak lists using the SearchGUI application and combines the results.

https://code.google.com/p/peptide-shaker/
Content homepage: http://compomics.github.io
Development repository: https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/galaxyp/peptideshaker/78fad25eff17
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker
Type: unrestricted
Revision: 29:78fad25eff17
This revision can be installed: True
Times cloned / installed: 2295
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_mono_4_0 revision 4912e4d532cd owned by iuc (prior install required)
Repository package_peptideshaker_1_11 revision bd41b685f845 owned by galaxyp

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
peptide_shaker 1.11 package
searchgui 2.9 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Perform protein identification using various search engines and prepare results for input to Peptide Shaker 2.9.0 any
Perform protein identification using various search engines based on results from SearchGUI 1.11.0 any

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA