Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository khmer_abundance_distribution_single
Owner: iuc
Synopsis: Wrapper for khmer tool: khmer: Abundance Distribution (all-in-one)
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as that
produced by the Illumina platform. khmer takes a k-mer-centric approach to
sequence analysis, hence the name.

The official repository is at https://github.com/ged-lab/khmer
and you can read the docs online here: http://khmer.readthedocs.org/

There are two mailing lists dedicated to khmer, an announcements-only list
and a discussion list. To search their archives and sign-up for them, please
visit the following URLs:

Discussion http://lists.idyll.org/listinfo/khmer
Announcements http://lists.idyll.org/listinfo/khmer-announce
Content homepage: https://khmer.readthedocs.org/
Type: unrestricted
Revision: 5:792d520ba676
This revision can be installed: True
Times cloned / installed: 615
Dependencies of this repository

Repository package_bz2file_0_98 revision 73382c8fa8f3 owned by iuc (prior install required)
Repository package_bz2file_0_98 revision 73382c8fa8f3 owned by iuc
Repository package_screed_0_9 revision 639e5e37404d owned by iuc
Repository package_setuptools_19_0 revision cb689698d484 owned by iuc (prior install required)
Repository package_bz2file_0_98 revision 73382c8fa8f3 owned by iuc

Name Version Type
bz2file 0.98 package
khmer 2.0 package
screed 0.9 package

Contents of this repository

Name Description Version Minimum Galaxy Version
Calculate abundance distribution of k-mers 2.0.0 any

Categories
Assembly - Tools for working with assemblies
Next Gen Mappers - Tools for the analysis and handling of Next Gen sequencing data