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Repository cell_intensity_processing
Name: cell_intensity_processing
Owner: goeckslab
Synopsis: Wrapper for MTI Utility: Process single-cell intensities
A suite of tool wrapper for Multiplex Tissue Imaging (MTI) utilities.
These include simple custom scripts for renaming channels in OME-TIFF metadata, 
and singal-processing for tabular intensity data. More utilities may be added in
the future. 
Content homepage: https://github.com/goeckslab/tools-mti/tree/main/tools/mti-utils
Development repository: https://github.com/goeckslab/tools-mti/tree/main/tools/mti-utils
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/goeckslab/cell_intensity_processing/7a77ed0e579a
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/goeckslab/cell_intensity_processing
Type: unrestricted
Revision: 1:7a77ed0e579a
This revision can be installed: True
Times cloned / installed: 233

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Options to correct for exposure time, autofluorescence subtraction, or compute signal-to-background ratio. 0.0.1+galaxy1 19.01

Categories
Imaging - Utilities to support imaging