| This Galaxy tool extracts ROI coordinates of QuPath TMA annotation by cell type. It takes a collection containing GeoJSON files with QuPath annotation data as input and generates a list of text files containing the ROI coordinates for each cell type. |
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/qupath_roi_splitter
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| Split ROI coordinates of QuPath TMA annotation by cell type (classification) | 0.2.0+galaxy0 | 16.01 | |