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Repository samtools_idxstats
Name: samtools_idxstats
Owner: devteam
Synopsis: BAM mapping statistics (using samtools idxstats)
Runs "samtools idxstats" to get mapping statistics from a sorted
index BAM file as a tabular output file.
Content homepage: http://www.htslib.org/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_idxstats
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/samtools_idxstats/7def34e6cf4d
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/samtools_idxstats
Type: unrestricted
Revision: 5:7def34e6cf4d
This revision can be installed: True
Times cloned / installed: 10880

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
reports stats of the BAM index file 2.0.4 20.05

Categories
SAM - Tools for manipulating alignments in the SAM format