Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository hicup_mapper
Name: hicup_mapper
Owner: bgruening
Synopsis: Wrapper for the HiCUP suite tool: Hicup Mapper
A galaxy wrapper implementation of the HiCUP-Pipeline from the Bioinformatics Babraham Institute. See http://www.bioinformatics.babraham.ac.uk/projects/hicup/
Content homepage: https://www.bioinformatics.babraham.ac.uk/projects/hicup/read_the_docs/html/index.html
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/hicup
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/bgruening/hicup_mapper/7f6fa513960e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicup_mapper
Type: unrestricted
Revision: 1:7f6fa513960e
This revision can be installed: True
Times cloned / installed: 526

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
aligns paired reads independently to a reference genome and retains reads where both partners align. 0.1.0 any

Categories
Epigenetics - Tools for analyzing Epigenetic/Epigenomic datasets