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Repository srst2
Name: srst2
Owner: iuc
Synopsis: Wrapper for the srst2 tool suite: SRST2
SRST2 tool is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
Content homepage: http://katholt.github.io/srst2/
Development repository: https://github.com/katholt/srst2
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/srst2/81cea47ec685
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/srst2
Type: unrestricted
Revision: 2:81cea47ec685
This revision can be installed: True
Times cloned / installed: 147

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Short Read Sequence Typing for Bacterial Pathogens 0.2.0+galaxy1 20.01

Categories
Metagenomics - Tools enabling the study of metagenomes