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Repository uniqprimer
Name: uniqprimer
Owner: dereeper
Synopsis: Uniqprimer designs specific primers of bacterial sequences
Uniqprimer designs specific primers of bacterial sequences. The goal of this tool is to accept a number of "include" FASTA files of diagnostic target genomes (draft or complete) and "exclude" files of non-target genomes, and output a list of PCR primers that will amplify target genomes but not non-target genomes.

Uniqprimer has been developped in Colorado State University by Jan Leach Lab, and encapsulated in Galaxy by IRRI (International Rice Reasearch Institute) and South Green bioinformatics platform
Development repository: https://github.com/SouthGreenPlatform/Uniqprimer
Link to this repository: https://toolshed.g2.bx.psu.edu/view/dereeper/uniqprimer/8218425fda1d
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/dereeper/uniqprimer
Type: unrestricted
Revision: 6:8218425fda1d
This revision can be installed: True
Times cloned / installed: 148

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Design specific primers of sequences 0.5.0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis