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Repository presto_collapseseq
Name: presto_collapseseq
Owner: iuc
Synopsis: pRESTO CollapseSeq (from the presto tool suite)
The REpertoire Sequencing TOolkit (pRESTO) is composed of a suite of utilities to handle all stages of
sequence processing prior to germline segment assignment. pRESTO is designed to handle either single reads or
paired-end reads. It includes features for quality control, primer masking, annotation of reads with sequence
embedded barcodes, generation of unique molecular identifier (UMI) consensus sequences, assembly of
paired-end reads and identification of duplicate sequences. Numerous options for sequence sorting, sampling
and conversion operations are also included.
Content homepage: https://presto.readthedocs.io/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/presto
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/presto_collapseseq/852e7ca7f7de
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/presto_collapseseq
Type: unrestricted
Revision: 4:852e7ca7f7de
This revision can be installed: True
Times cloned / installed: 199

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Remove/collapse duplicate sequences 0.6.2+galaxy0 20.05

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis