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Repository canu
Name: canu
Owner: bgruening
Synopsis: Canu is a hierarchical assembly pipeline designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION).
Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION).
Canu is a hierarchical assembly pipeline which runs in four steps:
  - Detect overlaps in high-noise sequences using MHAP
  - Generate corrected sequence consensus
  - Trim corrected sequences
  - Assemble trimmed corrected sequences
Content homepage: https://github.com/marbl/canu
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/canu
Link to this repository: https://toolshed.g2.bx.psu.edu/view/bgruening/canu/86f150c8019d
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/canu
Type: unrestricted
Revision: 4:86f150c8019d
This revision can be installed: True
Times cloned / installed: 790

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Name Description Version Minimum Galaxy Version
Assembler optimized for long error-prone reads such as PacBio, Oxford Nanopore 2.2+galaxy0 16.01