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Repository quast
Name: quast
Owner: iuc
Synopsis: Quast (Quality ASsessment Tool) evaluates genome assemblies.
QUAST evaluates genome assemblies by computing various metrics, including - N50, length for which the collection of all contigs of that length or longer covers at least 50% of assembly length, - NG50, where length of the reference genome is being covered, - NA50 and NGA50, where aligned blocks instead of contigs are taken, - misassemblies, misassembled and unaligned contigs or contigs bases, - genes and operons covered.
Content homepage: http://quast.bioinf.spbau.ru/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/quast/875d0f36d66f
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/quast
Type: unrestricted
Revision: 12:875d0f36d66f
This revision can be installed: True
Times cloned / installed: 3521

Contents of this repository

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Name Description Version Minimum Galaxy Version
Genome assembly Quality 5.0.2+galaxy4 20.01

Categories
Assembly - Tools for working with assemblies