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Repository mmseqs2_taxonomy_assignment
Name: mmseqs2_taxonomy_assignment
Owner: iuc
Synopsis: Wrapper for the MMseqs2 tool suite: MMseqs2 Taxonomy Assignments
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets. 
MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. 
The software is designed to run on multiple cores and servers and exhibits very good scalability. 
MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it achieves almost the same sensitivity. 
It can perform profile searches with the same sensitivity as PSI-BLAST at over 400 times its speed.
Content homepage: https://github.com/soedinglab/MMseqs2
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/mmsesq2
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/mmseqs2_taxonomy_assignment/876d26806584
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mmseqs2_taxonomy_assignment
Type: unrestricted
Revision: 2:876d26806584
This revision can be installed: True
Times cloned / installed: 26

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
of sequences by comparing them to a reference database 17-b804f+galaxy0 22.05

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Metagenomics - Tools enabling the study of metagenomes