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Repository kallisto_pseudo
Name: kallisto_pseudo
Owner: iuc
Synopsis: Kallisto pseudo function from the kallisto package
kallisto is a program for quantifying abundances of transcripts from RNA-Seq
data, or more generally of target sequences using high-throughput sequencing
reads. It is based on the novel idea of pseudoalignment for rapidly
determining the compatibility of reads with targets, without the need for
alignment.
Content homepage: https://pachterlab.github.io/kallisto/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/kallisto/
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/kallisto_pseudo/87c11c05d238
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/kallisto_pseudo
Type: unrestricted
Revision: 5:87c11c05d238
This revision can be installed: True
Times cloned / installed: 1273

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
- run pseudoalignment on RNA-Seq transcripts 0.46.2+galaxy0 20.05

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.