Repository seqprep
Name: seqprep
Owner: iuc
Synopsis: Tool for merging paired-end Illumina reads and trimming adapters.
SeqPrep is a program designed to merge paired-end Illumina reads that are overlapping into a single longer read and to trim adapters. It is particularly useful for preparing reads for downstream applications like genome assembly and SNP calling. The tool works by identifying and merging reads that are overlapping and trimming adapters based on user-defined sequences or default parameters.
Content homepage: https://github.com/jstjohn/SeqPrep
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqprep
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/seqprep/8a0aa44e1e5b
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/seqprep
Type: unrestricted
Revision: 0:8a0aa44e1e5b
This revision can be installed: True
Times cloned / installed: 90

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Merge and Trim Adapter Sequences from Paired-End Illumina Reads 1.3.2+galaxy0 22.05

Categories
Fastq Manipulation - Tools for manipulating fastq data
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis