GetOrganelle is a toolkit to accurately assemble organelle genomes from whole genome sequencing data. It recruits organelle-associated reads using a modified “baiting and iterative mapping” approach, conducts de novo assembly, filters and disentangles the assembly graph, and produces all possible configurations of circular organelle genomes. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/getorganelle
Name | Description | Version | Minimum Galaxy Version |
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1.7.6.1 | 16.01 |