Repository compute_q_values
Name: compute_q_values
Owner: devteam
Synopsis: Compute q-values based on multiple simultaneous tests p-values
This program computes the q-values based on the p-values of multiple
simultaneous tests. The q-values are computed using a specific R package, created
by John Storey and Alan Dabney, called "qvalue". The program takes five inputs.
Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tools/compute_q_values
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/compute_q_values/8b3593b7e5ec
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/compute_q_values
Type: unrestricted
Revision: 2:8b3593b7e5ec
This revision can be installed: True
Times cloned / installed: 2365
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_r_2_11_0 revision 5824d2b3bc8b owned by devteam (prior install required)
Repository package_r_2_11_0 revision 5824d2b3bc8b owned by devteam

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
R 2.11.0 package
bioc_qvalue 1.34.0 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
based on multiple simultaneous tests p-values 1.0.1 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA