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Repository quantification

Name: quantification

Owner: perssond

Synopsis: Module for single-cell data extraction given a segmentation mask and multi-channel image

Detailed description:

Module for single-cell data extraction given a segmentation mask and multi-channel image. The CSV structure is aligned with histoCAT output.

Content homepage: https://github.com/labsyspharm/quantification

Development repository: https://github.com/goeckslab/tools-mti/tree/main/tools/quantification

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/perssond/quantification/928db0f952e3

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/perssond/quantification

Type: unrestricted

Revision: 0:928db0f952e3

This revision can be installed: True

Times cloned / installed: 492

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Quantification View tool metadata	Single cell quantification, a module for single-cell data extraction given a segmentation mask and multi-channel image.	1.3.1.5	17.09