eXpress is a streaming tool for quantifying the abundances of a set of target sequences from sampled subsequences. Example applications include transcript-level RNA-Seq quantification, allele-specific/haplotype expression analysis (from RNA-Seq), transcription factor binding quantification in ChIP-Seq, and analysis of metagenomic data. http://bio.math.berkeley.edu/eXpress/overview.html |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/package_express_1_5_1
Name | Version | Type | |
---|---|---|---|
eXpress | 1.5.1 | package |