This repository has been marked as deprecated, so some tool shed features may be restricted.
Repository suite_metavisitor_1_0
Name: suite_metavisitor_1_0
Owner: drosofff
Synopsis: Collection of mississippi tools for virus detection or discovery from (small) RNA sequence datasets
Collection of mississippi tools for virus detection or discovery from (small) RNA sequence datasets
Content homepage: http://artbio.fr
Development repository: https://github.com/ARTbio/tools-artbio/tree/master/suites/suite_metavisitor_1_0
Link to this repository: https://toolshed.g2.bx.psu.edu/view/drosofff/suite_metavisitor_1_0/97e347e79abe
Type: repository_suite_definition
Revision: 3:97e347e79abe
This revision can be installed: True
Times cloned / installed: 74
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Repository package_bowtie_0_12_7 revision 9f9f38617a98 owned by devteam
Repository package_samtools_1_2 revision f6ae3ba3f3c1 owned by iuc
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Repository package_numpy_1_9 revision 83d12e13dbbd owned by iuc (prior install required)
Repository package_atlas_3_10 revision 98c017ec230d owned by iuc (prior install required)
Repository package_python_2_7 revision f761bd14343e owned by iuc (prior install required)
Repository package_ged_oases revision 76e8c94ea259 owned by drosofff
Repository package_ged_velvet revision 517ddcce2fa4 owned by drosofff (prior install required)
Repository blast_datatypes revision 01b38f20197e owned by devteam
Repository package_blast_plus_2_2_31 revision 921d2963a177 owned by iuc
Repository package_bowtie_2_2_6 revision 0d9cd7487cc9 owned by iuc
Repository package_samtools_1_2 revision f6ae3ba3f3c1 owned by iuc
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Repository package_bowtie_0_12_7 revision 9f9f38617a98 owned by devteam
Repository package_pysam_0_7_7 revision 0a5141bdf9d0 owned by iuc
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Repository package_r_3_1_2 revision 4d2fd1413b56 owned by iuc (prior install required)
Repository package_biocbasics_2_14 revision f0ef1a7b157e owned by mvdbeek (prior install required)
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Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_readline_6_3 revision ca1a9400d4e1 owned by iuc (prior install required)
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Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_fontconfig_2_11_1 revision d88d844df0cb owned by iuc (prior install required)
Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_r_3_1_2 revision 4d2fd1413b56 owned by iuc (prior install required)
Repository package_bz2file_0_98 revision 73382c8fa8f3 owned by iuc (prior install required)
Repository package_bz2file_0_98 revision 73382c8fa8f3 owned by iuc
Repository package_screed_0_9 revision 639e5e37404d owned by iuc
Repository package_setuptools_19_0 revision cb689698d484 owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_libtool_2_4 revision 7f67694b167c owned by iuc (prior install required)
Repository package_pixman_0_32_4 revision 93cd8e03820c owned by devteam (prior install required)
Repository package_libpng_1_6_7 revision 3de32cd300a9 owned by devteam (prior install required)
Repository package_freetype_2_5_2 revision a65217367e4a owned by devteam (prior install required)
Repository package_fontconfig_2_11_1 revision d88d844df0cb owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 3de32cd300a9 owned by devteam (prior install required)
Repository package_libpng_1_6_7 revision 3de32cd300a9 owned by devteam (prior install required)
Repository package_freetype_2_5_2 revision 1e86d1cf79a4 owned by iuc (prior install required)
Repository package_libxml2_2_9_1 revision 45b16a3ab504 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 588666932a32 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository yac_clipper revision a18edcf9c7ed owned by drosofff
Repository concatenate_multiple_datasets revision 201c568972c3 owned by mvdbeek
Repository msp_fasta_tabular_converter revision 951cb6b3979b owned by drosofff
Repository fetch_fasta_from_ncbi revision 79cb7620843d owned by drosofff
Repository cherry_pick_fasta revision f7684171dab3 owned by drosofff
Repository msp_blastparser_and_hits revision 8f5d48294f70 owned by drosofff
Repository blastn_to_scaffold revision ad9a1c117ac6 owned by drosofff
Repository blastx_to_scaffold revision 940c0c669e96 owned by drosofff
Repository fasta_filter_by_length revision e626b3ff9922 owned by devteam
Repository regex_find_replace revision 9ea374bb0350 owned by jjohnson

Categories
RNA - Utilities for RNA
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis