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Repository salsa
Name: salsa
Owner: iuc
Synopsis: A tool to scaffold long read assemblies with Hi-C
Salsa2 combines Hi-C linkage information with the ambiguous-edge information from a genome assembly graph to better resolve unitig orientations
Content homepage: https://github.com/marbl/SALSA
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/salsa2
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/salsa/9a22227bb6d0
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/salsa
Type: unrestricted
Revision: 4:9a22227bb6d0
This revision can be installed: True
Times cloned / installed: 458

Contents of this repository

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Name Description Version Minimum Galaxy Version
scaffold long read assemblies with Hi-C 2.3+galaxy3 20.01

Categories
Assembly - Tools for working with assemblies