Repository revision
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Repository gffread
Name: gffread
Owner: devteam
Synopsis: gffread filters and/or converts GFF3/GTF2 records
gffread filters and/or converts GFF3/GTF2 records and
can produce cdna, CDS, peptide fasta sequences. gffread is part
of the stringtie package (http://ccb.jhu.edu/software/stringtie)
Content homepage: http://ccb.jhu.edu/software/stringtie/gff.shtml#gffread/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffread
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/gffread/9f243677c4c6
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/gffread
Type: unrestricted
Revision: 3:9f243677c4c6
This revision can be installed: True
Times cloned / installed: 3821
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_cufflinks_2_2_1 revision 899067a260d1 owned by devteam

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
cufflinks 2.2.1 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Filters and/or converts GFF3/GTF2 records 2.2.1.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis