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Repository vcffixup
Name: vcffixup
Owner: devteam
Synopsis: Count the allele frequencies across alleles present in each record in the VCF file.
Uses genotypes from the VCF file to correct AC (alternate allele
count), AF (alternate allele frequency), NS (number of called), in the VCF records.
Content homepage: https://github.com/ekg/vcflib
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcffixup
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/vcffixup/a03f346b6aae
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcffixup
Type: unrestricted
Revision: 0:a03f346b6aae
This revision can be installed: True
Times cloned / installed: 3168
Dependencies of this repository

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Repository package_vcflib_8a5602bf07 revision 7e67466b033e owned by iuc

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
vcflib 8a5602bf07 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Count the allele frequencies across alleles present in each record in the VCF file 0.0.3 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA