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Repository gdcwebapp
Name: gdcwebapp
Owner: fabio
Synopsis: GDCWebApp automatically filter, extract, and convert genomic data from the Genomic Data Commons portal to BED, GTF, CSV, and JSON format
GDCWebApp is a web service to automatically query, filter, extract and convert genomic data and clinical information from the Genomic Data Commons portal (GDC) to BED, GTF, CSV, and JSON format. It is able to operate on all data types for each programs (TCGA and TARGET) available on GDC.

The service is available at http://bioinf.iasi.cnr.it/gdcwebapp/
Type: unrestricted
Revision: 37:a1e6f711031a
This revision can be installed: True
Times cloned / installed: 355
Dependencies of this repository

Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_readline_6_3 revision ca1a9400d4e1 owned by iuc (prior install required)
Repository package_bzlib_1_0 revision af4887e1f595 owned by iuc (prior install required)
Repository package_xz_5_0_5 revision 944f93d45594 owned by iuc (prior install required)
Repository package_sqlite_3_8_3 revision c8a5c11cc921 owned by iuc (prior install required)
Repository package_gdbm_1_11 revision ed2537bccffc owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_libtool_2_4 revision 7f67694b167c owned by iuc (prior install required)

Name Version Type
galaxy_json_collect_data_source 1.0.0 package
python 2.7.10 package

Contents of this repository

Name Description Version Minimum Galaxy Version
an intuitive interface to filter, extract, and convert Genomic Data Commons experiments 1.0.0 any

Categories
Convert Formats - Tools for converting data formats
Data Source - Tools for retrieving data from external data sources
Web Services - Tools enabling access to web services