| QUAST evaluates genome assemblies by computing various metrics, including - N50, length for which the collection of all contigs of that length or longer covers at least 50% of assembly length, - NG50, where length of the reference genome is being covered, - NA50 and NGA50, where aligned blocks instead of contigs are taken, - misassemblies, misassembled and unaligned contigs or contigs bases, - genes and operons covered. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/quast
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| Genome assembly Quality | 5.3.0+galaxy0 | 23.02 | |