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Repository samtools_slice_bam

Name: samtools_slice_bam

Owner: devteam

Synopsis: Slice BAM by provided regions

Detailed description:

Accepts an input BAM file and an input BED file and creates an
output BAM file containing only those alignments that overlap the provided BED intervals.

Content homepage: http://www.htslib.org/

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_slice_bam

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/samtools_slice_bam/a4a10c7924d1

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/samtools_slice_bam

Type: unrestricted

Revision: 3:a4a10c7924d1

This revision can be installed: True

Times cloned / installed: 8986